Here’s a notebook with an example visualization from a library we are developing for analysis and visualization of spatial transcriptomics data called Celldega
Zooming into the visualization loads sub-cellular transcript positions and cell polygons. This example is visualizing a dataset that is hosted on GitHub. The original data is obtained from a public 10X Genomics dataset.
The library is built using deck.gl, D3, and parquet-wasm. Thanks for all the amazing tutorials @kylebarron - Zero-copy Apache Arrow with WebAssembly / Kyle Barron | Observable they have been very helpful in this project.
We would like to enable our users to easily share example visualizations through ObservableHQ.